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INSTALL report for PCpheno on malbec1

This page was generated on 2021-05-05 12:10:29 -0400 (Wed, 05 May 2021).

To the developers/maintainers of the PCpheno package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1318/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PCpheno 1.52.0  (landing page)
Nolwenn Le Meur
Snapshot Date: 2021-05-04 14:50:13 -0400 (Tue, 04 May 2021)
URL: https://git.bioconductor.org/packages/PCpheno
Branch: RELEASE_3_12
Last Commit: 3715f48
Last Changed Date: 2020-10-27 10:32:41 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: PCpheno
Version: 1.52.0
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL PCpheno
StartedAt: 2021-05-04 17:20:12 -0400 (Tue, 04 May 2021)
EndedAt: 2021-05-04 17:20:34 -0400 (Tue, 04 May 2021)
EllapsedTime: 22.7 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL PCpheno
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* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘PCpheno’ ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
No methods found in package ‘Biobase’ for request: ‘listlen’ when loading ‘RpsiXML’
No methods found in package ‘annotate’ for requests: ‘pubmed’, ‘buildPubMedAbst’ when loading ‘RpsiXML’
No methods found in package ‘BiocGenerics’ for request: ‘plot’ when loading ‘SLGI’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package ‘Biobase’ for request: ‘listlen’ when loading ‘RpsiXML’
No methods found in package ‘annotate’ for requests: ‘pubmed’, ‘buildPubMedAbst’ when loading ‘RpsiXML’
No methods found in package ‘BiocGenerics’ for request: ‘plot’ when loading ‘SLGI’
** testing if installed package can be loaded from final location
No methods found in package ‘Biobase’ for request: ‘listlen’ when loading ‘RpsiXML’
No methods found in package ‘annotate’ for requests: ‘pubmed’, ‘buildPubMedAbst’ when loading ‘RpsiXML’
No methods found in package ‘BiocGenerics’ for request: ‘plot’ when loading ‘SLGI’
** testing if installed package keeps a record of temporary installation path
* DONE (PCpheno)