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INSTALL report for GOstats on tokay1

This page was generated on 2021-05-05 12:12:02 -0400 (Wed, 05 May 2021).

To the developers/maintainers of the GOstats package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 767/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOstats 2.56.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2021-05-04 14:50:13 -0400 (Tue, 04 May 2021)
URL: https://git.bioconductor.org/packages/GOstats
Branch: RELEASE_3_12
Last Commit: 8f988c3
Last Changed Date: 2020-10-27 10:24:14 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: GOstats
Version: 2.56.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GOstats_2.56.0.tar.gz && rm -rf GOstats.buildbin-libdir && mkdir GOstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GOstats.buildbin-libdir GOstats_2.56.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GOstats_2.56.0.zip && rm GOstats_2.56.0.tar.gz GOstats_2.56.0.zip
StartedAt: 2021-05-04 18:12:36 -0400 (Tue, 04 May 2021)
EndedAt: 2021-05-04 18:13:49 -0400 (Tue, 04 May 2021)
EllapsedTime: 72.5 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GOstats_2.56.0.tar.gz && rm -rf GOstats.buildbin-libdir && mkdir GOstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GOstats.buildbin-libdir GOstats_2.56.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GOstats_2.56.0.zip && rm GOstats_2.56.0.tar.gz GOstats_2.56.0.zip
###
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100 1570k  100 1570k    0     0  38.0M      0 --:--:-- --:--:-- --:--:-- 39.3M

install for i386

* installing *source* package 'GOstats' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GOstats'
    finding HTML links ... done
    GOHyperGResult-class                    html  
    GOstats-defunct                         html  
    GOstats-package                         html  
    Ndists                                  html  
    OBOHyperGResult-class                   html  
    compCorrGraph                           html  
    compGdist                               html  
    hyperGTest                              html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpURXzH8/R.INSTALL21247ac929ab/GOstats/man/hyperGTest.Rd:47: file link 'geneGoHyperGeoTest' in package 'Category' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpURXzH8/R.INSTALL21247ac929ab/GOstats/man/hyperGTest.Rd:48: file link 'geneKeggHyperGeoTest' in package 'Category' does not exist and so has been treated as a topic
    idx2dimnames                            html  
    makeGOGraph                             html  
    notConn                                 html  
    oneGOGraph                              html  
    probeSetSummary                         html  
    shortestPath                            html  
    simLL                                   html  
    termGraphs                              html  
    triadCensus                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GOstats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GOstats' as GOstats_2.56.0.zip
* DONE (GOstats)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'GOstats' successfully unpacked and MD5 sums checked