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INSTALL report for GENESIS on malbec1

This page was generated on 2021-05-05 12:09:54 -0400 (Wed, 05 May 2021).

To the developers/maintainers of the GENESIS package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 700/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GENESIS 2.20.1  (landing page)
Stephanie M. Gogarten
Snapshot Date: 2021-05-04 14:50:13 -0400 (Tue, 04 May 2021)
URL: https://git.bioconductor.org/packages/GENESIS
Branch: RELEASE_3_12
Last Commit: d7ecf7b
Last Changed Date: 2021-01-27 20:13:23 -0400 (Wed, 27 Jan 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: GENESIS
Version: 2.20.1
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL GENESIS
StartedAt: 2021-05-04 17:14:28 -0400 (Tue, 04 May 2021)
EndedAt: 2021-05-04 17:14:55 -0400 (Tue, 04 May 2021)
EllapsedTime: 27.2 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL GENESIS
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* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘GENESIS’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c fht.c -o fht.o
gcc -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o GENESIS.so fht.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-GENESIS/00new/GENESIS/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
  undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
  undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
  undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path
* DONE (GENESIS)