CellScape is a visualization tool for integrating single cell
phylogeny with genomic content to clearly display evolutionary
progression and tumour heterogeneity.
Installation
To install CellScape, type the following commands in R:
if (!requireNamespace("BiocManager", quietly = TRUE)) {
install.packages("BiocManager")
}
BiocManager::install("cellscape")
Examples
Run the examples by:
One of these, for example, is copy number data of a triple negative
breast cancer patient published in Wang et al. (2014).