Rtreemix

DOI: 10.18129/B9.bioc.Rtreemix    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see Rtreemix.

Rtreemix: Mutagenetic trees mixture models.

Bioconductor version: 3.9

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina.bogojeska at gmail.com>

Citation (from within R, enter citation("Rtreemix")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rtreemix")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rtreemix")

 

PDF R Script Rtreemix
PDF   Reference Manual

Details

biocViews Software, StatisticalMethod
Version 1.46.0
In Bioconductor since BioC 2.2 (R-2.7) (11.5 years)
License LGPL
Depends R (>= 2.5.0)
Imports methods, graph, Biobase, Hmisc
LinkingTo
Suggests Rgraphviz
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rtreemix_1.46.0.tar.gz
Windows Binary Rtreemix_1.46.0.zip
Mac OS X 10.11 (El Capitan) Rtreemix_1.46.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rtreemix
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rtreemix
Package Short Url https://bioconductor.org/packages/Rtreemix/
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