geuvStore2

DOI: 10.18129/B9.bioc.geuvStore2    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see geuvStore2.

demonstrate storage discipline for eQTL enumerations, revised

Bioconductor version: 3.8

demonstrate storage discipline for eQTL enumerations and analyses based on a selection of GEUVADIS results

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("geuvStore2")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("geuvStore2")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geuvStore2")

 

PDF R Script geuvStore: sharded storage for cis-association statistics
PDF   Reference Manual

Details

biocViews ExperimentData, MicroarrayData, SequencingData
Version 1.12.0
License Artistic-2.0
Depends BatchJobs, GenomicRanges
Imports methods, gQTLBase
LinkingTo
Suggests Homo.sapiens, knitr (>= 1.7), rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me gQTLBase, gQTLstats
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geuvStore2_1.12.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/geuvStore2
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geuvStore2
Package Short Url http://bioconductor.org/packages/geuvStore2/
Package Downloads Report Download Stats

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