read_motifs {universalmotif}R Documentation

Import universalmotif formatted motifs.

Description

Import motifs created from write_motifs(). For optimal storage of universalmotif class motifs, consider using saveRDS() and readRDS(). The universalmotif format will not be documented, as realistically the need to generate these manually/elsewhere should be nonexistent.

Usage

read_motifs(file, skip = 0)

Arguments

file

character(1) File name.

skip

numeric(1) If not zero, will skip however many desired lines in the file before starting to read.

Value

list universalmotif objects.

Author(s)

Benjamin Jean-Marie Tremblay, b2tremblay@uwaterloo.ca

See Also

Other read_motifs: read_cisbp, read_homer, read_jaspar, read_matrix, read_meme, read_transfac, read_uniprobe


[Package universalmotif version 1.0.22 Index]