orientBy {soGGi}R Documentation

Set strand by overlapping or nearest anchor GRanges

Description

Set strand by overlapping or nearest anchor GRanges

Usage

orientBy(testRanges, anchorRanges)

Arguments

testRanges

The GRanges object to anchor.

anchorRanges

A GRanges object by which to anchor strand orientation.

Value

newRanges A GRanges object.

Examples

data(ik_Example)
strand(ik_Example[[1]]) <- "+"
anchoredGRanges <- orientBy(ik_Example[[2]],ik_Example[[1]])

[Package soGGi version 1.14.0 Index]