getMedSenLineActivity {rcellminer} | R Documentation |
Returns a vector of median sensitive cell line activity (-logGI50) values for a set of compounds.
getMedSenLineActivity(idSet, senLineActZThreshold = 0.5, onlyCellMinerExps = TRUE, dataSource = "NCI60")
idSet |
a character vector specifying identifier(s) for compound(s) of interest. |
senLineActZThreshold |
the minimum activity z-score for a sensitive cell line (default=0.5). |
onlyCellMinerExps |
a logical value indicating whether to base results strictly on experimental data included in CellMiner (default=TRUE). |
dataSource |
character string indicating data source (default="NCI60"). Currently only "NCI60" is supported. |
a numeric vector of median sensitive cell line activity (-logGI50) values indexed by the identifiers in idSet.
idSet <- c("609699", "740") getMedSenLineActivity(idSet)