list.significant.responses {netresponse}R Documentation

Listing significant responses

Description

List responses with significant associations to a given sample group.

Usage

list.significant.responses(model, sample, qth = 1,
  method = "hypergeometric")

Arguments

model

NetResponseModel object.

sample

User-specified samples group for which the enrichments are calculated. For instance, an annotation category.

qth

q-value threshold for enrichments

method

Enrichment method.

Value

Statistics of the significantly associated responses.

Author(s)

Leo Lahti leo.lahti@iki.fi

References

See citation("netresponse")

See Also

response.enrichment

Examples

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[Package netresponse version 1.42.0 Index]