findRAfromCount {PathoStat}R Documentation

Return the Relative Abundance (RA) data for the given count OTU table

Description

Return the Relative Abundance (RA) data for the given count OTU table

Usage

findRAfromCount(count_otu)

Arguments

count_otu

Count OTU table

Value

ra_otu Relative Abundance (RA) OTU table

Examples

data_dir <- system.file("data", package = "PathoStat")
infileName <- "pstat_data.rda"
pstat_test <- loadPstat(data_dir, infileName)
ra_otu <- findRAfromCount(phyloseq::otu_table(pstat_test))

[Package PathoStat version 1.8.4 Index]