convertToOneBasedRanges {ORFik} | R Documentation |
There are 3 ways of doing this 1. Take 5' ends, reduce away rest (5prime) 2. Tile and include all (tileAll) 3. Take middle point per GRanges (middle)
convertToOneBasedRanges(gr, method = "5prime", addScoreColumn = FALSE)
gr |
GRanges Object to reduce |
method |
the method to reduce, see info. (5prime defualt) |
addScoreColumn |
logical (FALSE), if TRUE, add a score column that sums up the hits per position. |
Converted GRanges object
Other utils: bedToGR
, findFa
,
fread.bed
, is.gr_or_grl
,
is.grl
, validGRL