qBBT {CSSP} | R Documentation |
Compute the quantile estimate for the bin-level poisson parameters.
qBBT(fit, prob, depth = fit@lambday, lower = FALSE) ## S4 method for signature 'CSSPFit' qBBT(fit, prob, depth = fit@lambday, lower = FALSE)
fit |
A CSSPFit-class object for the CSSP model. |
prob |
A numeric value for the percentile level of bin-level poisson parameters. |
depth |
A numeric value for the sequencing depth at which the quantile is evaluated. |
lower |
A logical value. If TRUE, the lower quantile is computed. If FALSE (Default), the upper quantile is computed. |
A numeric value for the percentile of bin-level poisson parameters.
Chandler Zuo zuo@stat.wisc.edu
data( sampleFit ) qBBT( sampleFit, prob = 0.99, depth = sampleFit@lambday*0.1 )