toSifnx {paxtoolsr} | R Documentation |
Converts BioPAX OWL file to extended binary SIF representation
toSifnx(inputFile, outputFile = tempfile())
inputFile |
a string with the name of the input BioPAX OWL file |
outputFile |
a string with the name of the output file for SIFNX information |
Information on SIF conversion is provided on the Pathway Commons site: http://www.pathwaycommons.org/pc2/
see readSifnx()
inputFile <- system.file("extdata", "raf_map_kinase_cascade_reactome.owl", package="paxtoolsr") results <- toSifnx(inputFile=inputFile)