read.FCSheader {flowCore} | R Documentation |
Read (part of) the TEXT section of a Data File Standard for Flow Cytometry that contains FACS keywords.
read.FCSheader(files, path=".", keyword=NULL, emptyValue = TRUE)
files |
Character vector of filenames. |
path |
Directory where to look for the files. |
keyword |
An optional character vector that specifies the FCS keyword to read. |
emptyValue |
see |
The function read.FCSheader
works with the output of the FACS machine
software from a number of vendors (FCS 2.0, FCS 3.0 and List Mode Data
LMD). The output of the function is the TEXT section of the
FCS files. The user can specify some keywords to limit the output to the
information of interest.
A list of character vector. Each element of the list correspond to one FCS file.
N.Le Meur
link[flowCore]{read.flowSet}
, link[flowCore]{read.FCS}
samp <- read.FCSheader(system.file("extdata", "0877408774.B08", package="flowCore")) samp samp <- read.FCSheader(system.file("extdata", "0877408774.B08", package="flowCore"), keyword=c("$DATE", "$FIL")) samp