ALLModules {eisa} | R Documentation |
The Iterative Signature Algorithm (ISA) is a biclustering
method. ALLModules
and ALLModulesSmall
are example ISA
biclusters (=modules) found in the ALL data set.
ALLModules ALLModulesSmall
Both ALLModules
and ALLModulesSmall
are instances
of the ISAModules
class.
ISAModules
was generated by calling ISA
on the
ALL
data set, using the default
parameters. ISAModulesSmall
was generated the same way, but
with gene threshold 2.7 and condition threshold 1.4 only.
Bergmann S, Ihmels J, Barkai N: Iterative signature algorithm for the analysis of large-scale gene expression data Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Mar;67(3 Pt 1):031902. Epub 2003 Mar 11.
The ALL
BioConductor package.
data(ALLModules) ALLModules