prepareProteome {dagLogo} | R Documentation |
prepare proteome from UniProt webserver or a fasta file
prepareProteome(UniProt.ws, fasta, species="unknown")
UniProt.ws |
an object of UniProt.ws |
fasta |
fasta file name or an object of AAStringSet |
species |
an character to assign the species of the proteome |
an object of Proteome which contain protein sequence information
Jianhong Ou
formatSequence
, buildBackgroundModel
if(interactive()){ library(UniProt.ws) UniProt.ws <- UniProt.ws(taxId=7227) proteome <- prepareProteome(UniProt.ws, species="Drosophila melanogaster") }