KEGG_path2extid {clusterProfiler} | R Documentation |
query all genes in a KEGG pathway or module
KEGG_path2extid(keggID, species = sub("\\d+$", "", keggID), keggType = "Path", keyType = "kegg")
keggID |
KEGG ID, path or module ID |
species |
species |
keggType |
one of 'Path' or 'Module' |
keyType |
KEGG gene type, one of "ncbi-proteinid", "ncbi-geneid", "uniprot", or "kegg" |
extid vector
guangchuang yu