patternMatcher {CoGAPS} | R Documentation |
PatternMatcher Shiny Ap
patternMatcher(PBySet = NULL, out = NULL, order = NULL, sample.color = NULL)
PBySet |
list of matched set solutions for the Pmatrix from an NMF algorithm |
out |
optional name for saving output |
order |
optional vector indicating order of samples for plotting. Default is NULL. |
sample.color |
optional vector of colors of same length as colnames. Default is NULL. |
either an index of selected sets' contributions or the editted PBySet
object