createscCoGAPSSets {CoGAPS}R Documentation

Create Gene Sets for scCoGAPS

Description

factors whole genome data into randomly generated sets for indexing

Usage

createscCoGAPSSets(D, nSets, simulationName, samplingRatio = NULL,
  path = "", anotionObj = NULL)

Arguments

D

data matrix

nSets

number of sets to partition the data into

simulationName

name used to identify files created by this simulation

samplingRatio

vector of relative quantities to use for sampling celltypes

path

character string indicating were to save resulting data objects. default is current working dir

anotionObj

vector of same length as number of columns of D

Value

simulationName used to identify saved files

Examples

data(SimpSim)
createscCoGAPSSets(SimpSim.D, nSets=2, simulationName="example")

[Package CoGAPS version 3.0.2 Index]