BiocWorkflowTools

DOI: 10.18129/B9.bioc.BiocWorkflowTools    

Tools to aid the development of Bioconductor Workflow packages

Bioconductor version: Release (3.6)

Provides functions to ease the transition between Rmarkdown and LaTeX documents when authoring a Bioconductor Workflow.

Author: Mike Smith [aut, cre], Andrzej OleÅ› [aut]

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("BiocWorkflowTools")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocWorkflowTools")

Documentation

HTML R Script Converting Rmarkdown to F1000Research LaTeX Format
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews ReportWriting, Software
Version 1.4.2
In Bioconductor since BioC 3.4 (R-3.3) (1.5 years)
License MIT + file LICENSE
Depends R (>= 3.3)
Imports BiocStyle, bookdown, git2r, httr, knitr, rmarkdown, stringr, tools, utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocWorkflowTools_1.4.2.tar.gz
Windows Binary BiocWorkflowTools_1.4.2.zip
Mac OS X 10.11 (El Capitan) BiocWorkflowTools_1.4.2.tgz
Source Repository git clone https://git.bioconductor.org/packages/BiocWorkflowTools
Package Short Url http://bioconductor.org/packages/BiocWorkflowTools/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.6 Source Archive

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: