get_core {PathoStat} | R Documentation |
Select rows of OTU matrix that meet given detection and prevalence thresholds
get_core(pstat, detection, prevalence)
pstat |
PathoStat object |
detection |
An integer specifying the minimum value considered to be "detected" |
prevalence |
An integer specifying the minimum number of samples that must be detected |
Subsetted PathoStat object