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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")
In most cases, you don't need to download the package archive at all.
RIPSeekerData
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test data for RIPSeeker
Bioconductor version: Release (3.4)
The RIP-seq data in BAM format are the test data for the package RIPSeeker. The data correspond to two RIP-seq experiments, namely PRC2 and CCNT1. Raw data from NCBI Gene Expression Omnibus under accession numbers GSE17064 for PRC2 and in-house for CCNT1.
Author: Yue Li
Maintainer: Alejandro Reyes <reyes at embl.de>
Citation (from within R,
enter citation("RIPSeekerData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RIPSeekerData")
| R Script | RIP-seq datasets for testing RIPSeeker package | |
| Reference Manual |
Details
| biocViews | ExperimentData, GEO, Genome, RIPSeqData, SequencingData, StemCell |
| Version | 1.10.0 |
| License | GPL-2 |
| Depends | RIPSeeker |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | RIPSeekerData_1.10.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/RIPSeekerData/ |
| Package Downloads Report | Download Stats |
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