To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Alyrata.JGI.v1")

In most cases, you don't need to download the package archive at all.

BSgenome.Alyrata.JGI.v1

Arabidopsis lyrata full genome (JGI version V1.0)

Bioconductor version: Release (3.4)

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel

Maintainer: Jian-Feng Mao <jianfeng.mao at gmail.com>

Citation (from within R, enter citation("BSgenome.Alyrata.JGI.v1")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Alyrata.JGI.v1")


PDF		Reference Manual

biocViews	Alyrata, AnnotationData, Genetics
Version	1.0.0
License	Artistic-2.0
Depends	BSgenome(>= 1.19.5)
Imports	BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Follow Installation instructions to use this package in your R session.

Package Source	BSgenome.Alyrata.JGI.v1_1.0.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Package Short Url	http://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: