To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("motifRG")

In most cases, you don't need to download the package archive at all.

motifRG

A package for discriminative motif discovery, designed for high throughput sequencing dataset

Bioconductor version: Release (3.4)

Tools for discriminative motif discovery using regression methods

Author: Zizhen Yao

Maintainer: Zizhen Yao <yzizhen at fhcrc.org>

Citation (from within R, enter citation("motifRG")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("motifRG")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("motifRG")

PDF	R Script	motifRG: regression-based discriminative motif discovery
PDF		Reference Manual

biocViews	MotifDiscovery, Software, Transcription
Version	1.18.0
In Bioconductor since	BioC 2.10 (R-2.15) (5 years)
License	Artistic-2.0
Depends	R (>= 2.15), Biostrings(>= 2.26), IRanges, seqLogo, parallel, methods, grid, graphics, BSgenome, XVector, BSgenome.Hsapiens.UCSC.hg19
Imports	Biostrings, IRanges, seqLogo, parallel, methods, grid, graphics, XVector
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	RCAS
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	motifRG_1.18.0.tar.gz
Windows Binary	motifRG_1.18.0.zip
Mac OS X 10.9 (Mavericks)	motifRG_1.18.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/motifRG/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/motifRG/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: