To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("clusterExperiment")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.4)
This package provides functions for running and comparing many different clusterings of single-cell sequencing data.
Author: Elizabeth Purdom [aut, cre, cph], Davide Risso [aut], Marla Johnson [ctb]
Maintainer: Elizabeth Purdom <epurdom at stat.berkeley.edu>
Citation (from within R,
enter citation("clusterExperiment")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("clusterExperiment")
HTML | R Script | clusterExperiment Vignette |
Reference Manual | ||
Text | NEWS |
biocViews | Clustering, RNASeq, Sequencing, Software |
Version | 1.0.0 |
In Bioconductor since | BioC 3.4 (R-3.3) (0.5 years) |
License | Artistic-2.0 |
Depends | R (>= 3.3), methods, SummarizedExperiment |
Imports | NMF, RColorBrewer, ape, phylobase, cluster, stats, limma, dendextend, howmany, locfdr, matrixStats, graphics, parallel |
LinkingTo | |
Suggests | BiocStyle, knitr, diagram, testthat, scRNAseq |
SystemRequirements | |
Enhances | |
URL | |
BugReports | https://github.com/epurdom/clusterExperiment/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | clusterExperiment_1.0.0.tar.gz |
Windows Binary | clusterExperiment_1.0.0.zip |
Mac OS X 10.9 (Mavericks) | clusterExperiment_1.0.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/clusterExperiment/tree/release-3.4 |
Package Short Url | http://bioconductor.org/packages/clusterExperiment/ |
Package Downloads Report | Download Stats |
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