To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("NGScopyData")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.3)
Subset of BAM files of human lung tumor and pooled normal samples by targeted panel sequencing. [Zhao et al 2014. Targeted Sequencing in Non-Small Cell Lung Cancer (NSCLC) Using the University of North Carolina (UNC) Sequencing Assay Captures Most Previously Described Genetic Aberrations in NSCLC. In preparation.] Each sample is a 10 percent random subsample drawn from the original sequencing data. The pooled normal sample has been rescaled accroding to the total number of normal samples in the "pool". Here provided is the subsampled data on chr6 (hg19).
Author: Xiaobei Zhao [aut, cre, cph]
Maintainer: Xiaobei Zhao <xiaobei at binf.ku.dk>
Citation (from within R,
enter citation("NGScopyData")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("NGScopyData")
Reference Manual |
biocViews | CancerData, ExperimentData, LungCancerData, SequencingData |
Version | 0.106.0 |
License | GPL (>=2) |
Depends | |
Imports | |
LinkingTo | |
Suggests | |
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Enhances | |
URL | http://www.bioconductor.org/packages/release/data/experiment/html/NGScopyData.html |
Depends On Me | |
Imports Me | |
Suggests Me | NGScopy |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | NGScopyData_0.106.0.tar.gz |
Windows Binary | |
Mac OS X 10.9 (Mavericks) | |
Subversion source | (username/password: readonly) |
Package Short Url | http://bioconductor.org/packages/NGScopyData/ |
Package Downloads Report | Download Stats |
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