To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("MMDiffBamSubset")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.3)
Subset of BAM files, including WT_2.bam, Null_2.bam, Resc_2.bam, Input.bam from the "Cfp1" experiment (see Clouaire et al., Genes Dev. 2012). Data is available under ArrayExpress accession numbers E-ERAD-79. Additionally, corresponding subset of peaks called by MACS
Author: Gabriele Schweikert
Maintainer: Gabriele Schweikert <G.Schweikert at ed.ac.uk>
Citation (from within R,
enter citation("MMDiffBamSubset")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("MMDiffBamSubset")
Reference Manual |
biocViews | ArrayExpress, ChIPSeqData, DNASeqData, ExperimentData, Genome, Mus_musculus_Data, StemCell |
Version | 1.8.0 |
License | LGPL |
Depends | |
Imports | |
LinkingTo | |
Suggests | MMDiff |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | ChIPpeakAnno, MMDiff, MMDiff2 |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | MMDiffBamSubset_1.8.0.tar.gz |
Windows Binary | |
Mac OS X 10.9 (Mavericks) | |
Subversion source | (username/password: readonly) |
Package Short Url | http://bioconductor.org/packages/MMDiffBamSubset/ |
Package Downloads Report | Download Stats |
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