To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("LungCancerLines")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.3)
Reads from an RNA-seq experiment between two lung cancer cell lines: H1993 (met) and H2073 (primary). The reads are stored as Fastq files and are meant for use with the TP53Genome object in the gmapR package.
Author: Cory Barr, Michael Lawrence
Maintainer: Cory Barr <barr.cory at gene.com>
Citation (from within R,
enter citation("LungCancerLines")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("LungCancerLines")
Reference Manual |
biocViews | CancerData, ExperimentData, Genome, LungCancerData, RNASeqData |
Version | 0.10.0 |
License | Artistic-2.0 |
Depends | |
Imports | Rsamtools |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | gmapR, HTSeqGenie, VariantTools |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | LungCancerLines_0.10.0.tar.gz |
Windows Binary | |
Mac OS X 10.9 (Mavericks) | |
Subversion source | (username/password: readonly) |
Package Short Url | http://bioconductor.org/packages/LungCancerLines/ |
Package Downloads Report | Download Stats |
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