To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("copa")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.3)
COPA is a method to find genes that undergo recurrent fusion in a given cancer type by finding pairs of genes that have mutually exclusive outlier profiles.
Author: James W. MacDonald
Maintainer: James W. MacDonald <jmacdon at u.washington.edu>
Citation (from within R,
enter citation("copa")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("copa")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("copa")
R Script | copa Overview | |
Reference Manual |
biocViews | DifferentialExpression, OneChannel, Software, TwoChannel, Visualization |
Version | 1.40.0 |
In Bioconductor since | BioC 1.8 (R-2.3) (10.5 years) |
License | Artistic-2.0 |
Depends | Biobase, methods |
Imports | |
LinkingTo | |
Suggests | colonCA |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | copa_1.40.0.tar.gz |
Windows Binary | copa_1.40.0.zip (32- & 64-bit) |
Mac OS X 10.9 (Mavericks) | copa_1.40.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/copa/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/copa/ |
Package Downloads Report | Download Stats |
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