To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("SigFuge")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.3)
Algorithm for testing significance of clustering in RNA-seq data.
Author: Patrick Kimes, Christopher Cabanski
Maintainer: Patrick Kimes <patrick.kimes at gmail.com>
Citation (from within R,
enter citation("SigFuge")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("SigFuge")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SigFuge")
R Script | SigFuge Tutorial | |
Reference Manual |
biocViews | Clustering, RNASeq, Software, Visualization |
Version | 1.10.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (3 years) |
License | GPL-3 |
Depends | R (>= 3.1.1), GenomicRanges |
Imports | ggplot2, matlab, reshape, sigclust |
LinkingTo | |
Suggests | org.Hs.eg.db, prebsdata, Rsamtools(>= 1.17.0), TxDb.Hsapiens.UCSC.hg19.knownGene, BiocStyle |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | SigFuge_1.10.0.tar.gz |
Windows Binary | SigFuge_1.10.0.zip |
Mac OS X 10.9 (Mavericks) | SigFuge_1.10.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/SigFuge/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/SigFuge/ |
Package Downloads Report | Download Stats |
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