To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("OTUbase")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.3)
Provides a platform for Operational Taxonomic Unit based analysis
Author: Daniel Beck, Matt Settles, and James A. Foster
Maintainer: Daniel Beck <danlbek at gmail.com>
Citation (from within R,
enter citation("OTUbase")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("OTUbase")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("OTUbase")
R Script | An introduction to OTUbase | |
Reference Manual |
biocViews | DataImport, Sequencing, Software |
Version | 1.22.0 |
In Bioconductor since | BioC 2.7 (R-2.12) (6 years) |
License | Artistic-2.0 |
Depends | R (>= 2.9.0), methods, S4Vectors, IRanges, ShortRead(>= 1.23.15), Biobase, vegan |
Imports | Biostrings |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | mcaGUI |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | OTUbase_1.22.0.tar.gz |
Windows Binary | OTUbase_1.22.0.zip |
Mac OS X 10.9 (Mavericks) | OTUbase_1.22.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/OTUbase/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/OTUbase/ |
Package Downloads Report | Download Stats |
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