Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

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Documentation for package ‘ArrayExpress’ version 1.68.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

ae2bioc	Convert MAGE-TAB files from raw data into a Bioconductor object
ArrayExpress	R objects from ArrayExpress collection
extract.zip	Unzip archives in a specified directory
getAE	Download MAGE-TAB files from the ArrayExpress collection in a specified directory
getcolproc	Return the possible column names from processed MAGE-TAB files
getcolraw	Return the possible column names from raw MAGE-TAB files
procset	Convert processed MAGE-TAB files into a Bioconductor object
queryAE	Query of the ArrayExpress collection in Biostudies