To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("rnaseqcomp")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
Several quantitative and visualized benchmarks for RNA-seq quantification pipelines. Two-condition quantifications for genes, transcripts, junctions or exons by each pipeline with nessasery meta information should be organizd into numeric matrices in order to proceed the evaluation.
Author: Mingxiang Teng and Rafael A. Irizarry
Maintainer: Mingxiang Teng <tengmx at gmail.com>
Citation (from within R,
enter citation("rnaseqcomp")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("rnaseqcomp")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rnaseqcomp")
rnaseqcomp.pdf | ||
Reference Manual | ||
Text | NEWS |
biocViews | QualityControl, RNASeq, Software, Visualization |
Version | 1.0.2 |
In Bioconductor since | BioC 3.2 (R-3.2) (0.5 years) |
License | GPL-3 |
Depends | R (>= 3.2.0) |
Imports | RColorBrewer, methods |
LinkingTo | |
Suggests | BiocStyle, knitr, rmarkdown |
SystemRequirements | |
Enhances | |
URL | https://github.com/tengmx/rnaseqcomp |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | rnaseqcomp_1.0.2.tar.gz |
Windows Binary | rnaseqcomp_1.0.2.zip |
Mac OS X 10.6 (Snow Leopard) | rnaseqcomp_1.0.0.tgz |
Mac OS X 10.9 (Mavericks) | rnaseqcomp_1.0.2.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/rnaseqcomp/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/rnaseqcomp/ |
Package Downloads Report | Download Stats |
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