To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("nethet")
In most cases, you don't need to download the package archive at all.
![]() ![]() |
Bioconductor version: 3.2
Package nethet is an implementation of statistical solid methodology enabling the analysis of network heterogeneity from high-dimensional data. It combines several implementations of recent statistical innovations useful for estimation and comparison of networks in a heterogeneous, high-dimensional setting. In particular, we provide code for formal two-sample testing in Gaussian graphical models (differential network and GGM-GSA; Stadler and Mukherjee, 2013, 2014) and make a novel network-based clustering algorithm available (mixed graphical lasso, Stadler and Mukherjee, 2013).
Author: Nicolas Staedler, Frank Dondelinger
Maintainer: Nicolas Staedler <staedler.n at gmail.com>, Frank Dondelinger <fdondelinger.work at gmail.com>
Citation (from within R,
enter citation("nethet")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("nethet")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("nethet")
nethet | ||
Reference Manual | ||
Text | NEWS |
biocViews | Clustering, GraphAndNetwork, Software |
Version | 1.2.0 |
In Bioconductor since | BioC 3.1 (R-3.2) (1 year) |
License | GPL-2 |
Depends | |
Imports | glasso, mvtnorm, parcor, GeneNet, huge, CompQuadForm, ggm, mclust, parallel, GSA, limma, multtest, ICSNP, glmnet, network, ggplot2 |
LinkingTo | |
Suggests | knitr, xtable, BiocStyle |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | nethet_1.2.0.tar.gz |
Windows Binary | nethet_1.2.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | nethet_1.2.0.tgz |
Mac OS X 10.9 (Mavericks) | nethet_1.2.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/nethet/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/nethet/ |
Package Downloads Report | Download Stats |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: