To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("muscle")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
MUSCLE performs multiple sequence alignments of nucleotide or amino acid sequences.
Author: Algorithm by Robert C. Edgar. R port by Alex T. Kalinka.
Maintainer: Alex T. Kalinka <alex.t.kalinka at gmail.com>
Citation (from within R,
enter citation("muscle")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("muscle")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("muscle")
A guide to using muscle | ||
Reference Manual | ||
Text | NEWS |
biocViews | Alignment, DataImport, Genetics, MultipleSequenceAlignment, SequenceMatching, Sequencing, Software |
Version | 3.12.0 |
In Bioconductor since | BioC 3.1 (R-3.2) (1 year) |
License | Unlimited |
Depends | Biostrings |
Imports | |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | http://www.drive5.com/muscle/ |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | muscle_3.12.0.tar.gz |
Windows Binary | muscle_3.12.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | muscle_3.12.0.tgz |
Mac OS X 10.9 (Mavericks) | muscle_3.12.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/muscle/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/muscle/ |
Package Downloads Report | Download Stats |
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