To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("gcatest")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
GCAT is an association test for genome wide association studies that controls for population structure under a general class of trait. models.
Author: Wei Hao, Minsun Song, John D. Storey
Maintainer: Wei Hao <whao at princeton.edu>, John D. Storey <jstorey at princeton.edu>
Citation (from within R,
enter citation("gcatest")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("gcatest")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("gcatest")
gcat Package | ||
Reference Manual |
biocViews | DimensionReduction, GenomeWideAssociation, PrincipalComponent, SNP, Software |
Version | 1.0.0 |
In Bioconductor since | BioC 3.2 (R-3.2) (0.5 years) |
License | GPL-3 |
Depends | R (>= 3.2) |
Imports | lfa |
LinkingTo | |
Suggests | knitr, ggplot2 |
SystemRequirements | |
Enhances | |
URL | https://github.com/StoreyLab/gcatest |
BugReports | https://github.com/StoreyLab/gcatest/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | gcatest_1.0.0.tar.gz |
Windows Binary | gcatest_1.0.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | gcatest_1.0.0.tgz |
Mac OS X 10.9 (Mavericks) | gcatest_1.0.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/gcatest/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/gcatest/ |
Package Downloads Report | Download Stats |
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