To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("flowFit")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
This package estimate the proliferation of a cell population in cell-tracking dye studies. The package uses an R implementation of the Levenberg-Marquardt algorithm (minpack.lm) to fit a set of peaks (corresponding to different generations of cells) over the proliferation-tracking dye distribution in a FACS experiment.
Author: Davide Rambaldi
Maintainer: Davide Rambaldi <davide.rambaldi at gmail.com>
Citation (from within R,
enter citation("flowFit")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("flowFit")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowFit")
Fitting Functions for Flow Cytometry Data | ||
Reference Manual |
biocViews | CellBasedAssays, FlowCytometry, Software |
Version | 1.8.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (2.5 years) |
License | Artistic-2.0 |
Depends | R (>= 2.12.2) |
Imports | flowCore, flowViz, graphics, kza, methods, minpack.lm, gplots |
LinkingTo | |
Suggests | flowFitExampleData |
SystemRequirements | |
Enhances | |
URL | |
BugReports | Davide Rambaldi |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | flowFit_1.8.0.tar.gz |
Windows Binary | flowFit_1.8.0.zip |
Mac OS X 10.6 (Snow Leopard) | flowFit_1.8.0.tgz |
Mac OS X 10.9 (Mavericks) | flowFit_1.8.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/flowFit/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/flowFit/ |
Package Downloads Report | Download Stats |
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