To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("erccdashboard")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
Technical performance metrics for differential gene expression experiments using External RNA Controls Consortium (ERCC) spike-in ratio mixtures.
Author: Sarah Munro, Steve Lund
Maintainer: Sarah Munro <sarah.munro at nist.gov>
Citation (from within R,
enter citation("erccdashboard")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("erccdashboard")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("erccdashboard")
erccdashboard examples | ||
Reference Manual | ||
Text | NEWS |
biocViews | AlternativeSplicing, BatchEffect, DifferentialExpression, DifferentialSplicing, GeneExpression, Genetics, Microarray, MultipleComparison, QualityControl, RNASeq, Software, Transcription, mRNAMicroarray |
Version | 1.4.0 |
In Bioconductor since | BioC 3.0 (R-3.1) (1.5 years) |
License | GPL (>=2) |
Depends | R (>= 3.1), ggplot2 (>= 1.0.1), gridExtra (>= 2.0.0) |
Imports | edgeR, gplots, grid, gtools, limma, locfit, MASS, plyr, QuasiSeq, qvalue, reshape2, ROCR, scales, stringr |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | http://www.nist.gov/mml/bbd/erccdashboard.cfm https://github.com/usnistgov/erccdashboard http://tinyurl.com/erccsrm |
BugReports | https://github.com/usnistgov/erccdashboard/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | erccdashboard_1.4.0.tar.gz |
Windows Binary | erccdashboard_1.4.0.zip |
Mac OS X 10.6 (Snow Leopard) | erccdashboard_1.4.0.tgz |
Mac OS X 10.9 (Mavericks) | erccdashboard_1.4.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/erccdashboard/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/erccdashboard/ |
Package Downloads Report | Download Stats |
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