To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("aroma.light")

In most cases, you don't need to download the package archive at all.

aroma.light

   

Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types

Bioconductor version: 3.2

Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.

Author: Henrik Bengtsson [aut, cre, cph], Pierre Neuvial [ctb]

Maintainer: Henrik Bengtsson <henrikb at braju.com>

Citation (from within R, enter citation("aroma.light")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("aroma.light")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Microarray, MultiChannel, OneChannel, Preprocessing, Software, TwoChannel, Visualization
Version 3.0.0
In Bioconductor since BioC 1.9 (R-2.4) (9.5 years)
License GPL (>= 2)
Depends R (>= 2.14.0)
Imports R.methodsS3 (>= 1.7.0), R.oo (>= 1.19.0), R.utils (>= 2.1.0), matrixStats (>= 0.14.2)
LinkingTo
Suggests princurve (>= 1.1-12)
SystemRequirements
Enhances
URL https://github.com/HenrikBengtsson/aroma.light http://www.aroma-project.org
BugReports https://github.com/HenrikBengtsson/aroma.light/issues
Depends On Me
Imports Me EDASeq
Suggests Me TIN
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source aroma.light_3.0.0.tar.gz
Windows Binary aroma.light_3.0.0.zip
Mac OS X 10.6 (Snow Leopard) aroma.light_3.0.0.tgz
Mac OS X 10.9 (Mavericks) aroma.light_3.0.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/aroma.light/tree/release-3.2
Package Short Url http://bioconductor.org/packages/aroma.light/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center