To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("ampliQueso")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
The package provides tools and reports for the analysis of amplicon sequencing panels, such as AmpliSeq
Author: Alicja Szabelska <alicja.szabelska at up.poznan.pl>; Marek Wiewiorka <marek.wiewiorka at gmail.com>; Michal Okoniewski <michal at fgcz.ethz.ch>
Maintainer: Michal Okoniewski <michal at fgcz.ethz.ch>
Citation (from within R,
enter citation("ampliQueso")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("ampliQueso")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ampliQueso")
ampliQueso primer | ||
Reference Manual | ||
Text | NEWS |
biocViews | DifferentialExpression, GeneExpression, RNASeq, ReportWriting, Sequencing, Software, Transcription, Visualization |
Version | 1.8.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (2.5 years) |
License | GPL-2 |
Depends | R (>= 2.15.0), rnaSeqMap(>= 2.17.1), knitr, rgl, ggplot2, gplots, parallel, doParallel, foreach, VariantAnnotation, genefilter, statmod, xtable |
Imports | edgeR, DESeq, samr |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | ampliQueso_1.8.0.tar.gz |
Windows Binary | ampliQueso_1.8.0.zip |
Mac OS X 10.6 (Snow Leopard) | ampliQueso_1.8.0.tgz |
Mac OS X 10.9 (Mavericks) | ampliQueso_1.8.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/ampliQueso/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/ampliQueso/ |
Package Downloads Report | Download Stats |
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