DOI: 10.18129/B9.bioc.vsclust    

This is the development version of vsclust; for the stable release version, see vsclust.

Feature-based variance-sensitive quantitative clustering

Bioconductor version: Development (3.17)

Feature-based variance-sensitive clustering of omics data. Optimizes cluster assignment by taking into account individual feature variance. Includes several modules for statistical testing, clustering and enrichment analysis.

Author: Veit Schwaemmle [aut, cre]

Maintainer: Veit Schwaemmle <veits at bmb.sdu.dk>

Citation (from within R, enter citation("vsclust")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script VSClust on Bioconductor object
HTML R Script VSClust workflow
PDF   Reference Manual


biocViews Annotation, Clustering, DifferentialExpression, Metabolomics, PrincipalComponent, Proteomics, Software, Visualization
Version 1.1.0
In Bioconductor since BioC 3.16 (R-4.2) (< 6 months)
License GPL-2
Depends R (>= 4.2.0)
Imports matrixStats, limma, parallel, shiny, qvalue, grDevices, stats, MultiAssayExperiment, graphics
LinkingTo Rcpp
Suggests knitr, yaml, testthat (>= 3.0.0), rmarkdown, BiocStyle, clusterProfiler
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package vsclust_1.1.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/vsclust
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/vsclust
Package Short Url https://bioconductor.org/packages/vsclust/
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: