netboost

DOI: 10.18129/B9.bioc.netboost    

This is the development version of netboost; for the stable release version, see netboost.

Network Analysis Supported by Boosting

Bioconductor version: Development (3.17)

Boosting supported network analysis for high-dimensional omics applications. This package comes bundled with the MC-UPGMA clustering package by Yaniv Loewenstein.

Author: Pascal Schlosser [aut, cre], Jochen Knaus [aut, ctb], Yaniv Loewenstein [aut]

Maintainer: Pascal Schlosser <pascal.schlosser at uniklinik-freiburg.de>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("netboost")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	BiomedicalInformatics, Clustering, DimensionReduction, Epigenetics, GraphAndNetwork, Metabolomics, Network, Software, StatisticalMethod, Transcriptomics
Version	2.7.0
In Bioconductor since	BioC 3.9 (R-3.6) (3.5 years)
License	GPL-3
Depends	R (>= 4.0.0)
Imports	Rcpp, RcppParallel, parallel, grDevices, graphics, stats, utils, dynamicTreeCut, WGCNA, impute, colorspace, methods, R.utils
LinkingTo	Rcpp, RcppParallel
Suggests	knitr, markdown, rmarkdown
SystemRequirements	GNU make, Bash, Perl, Gzip
Enhances
URL	https://bioconductor.org/packages/release/bioc/html/netboost.html
BugReports	https://github.com/PascalSchlosser/netboost/issues
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/netboost
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/netboost
Package Short Url	https://bioconductor.org/packages/netboost/
Package Downloads Report	Download Stats