DOI: 10.18129/B9.bioc.gtrellis    

This is the development version of gtrellis; for the stable release version, see gtrellis.

Genome Level Trellis Layout

Bioconductor version: Development (3.17)

Genome level Trellis graph visualizes genomic data conditioned by genomic categories (e.g. chromosomes). For each genomic category, multiple dimensional data which are represented as tracks describe different features from different aspects. This package provides high flexibility to arrange genomic categories and to add self-defined graphics in the plot.

Author: Zuguang Gu [aut, cre]

Maintainer: Zuguang Gu < at>

Citation (from within R, enter citation("gtrellis")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


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HTML R Script Make Genome-level Trellis Graph
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biocViews Sequencing, Software, Visualization
Version 1.31.0
In Bioconductor since BioC 3.1 (R-3.2) (7.5 years)
License MIT + file LICENSE
Depends R (>= 3.1.2), grid, IRanges, GenomicRanges
Imports circlize (>= 0.4.8), GetoptLong, grDevices, utils
Suggests testthat (>= 1.0.0), knitr, RColorBrewer, markdown, rmarkdown, ComplexHeatmap(>= 1.99.0), Cairo, png, jpeg, tiff
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