crisprVerse

DOI: 10.18129/B9.bioc.crisprVerse    

This is the development version of crisprVerse; for the stable release version, see crisprVerse.

Easily install and load the crisprVerse ecosystem for CRISPR gRNA design

Bioconductor version: Development (3.17)

The crisprVerse is a modular ecosystem of R packages developed for the design and manipulation of CRISPR guide RNAs (gRNAs). All packages share a common language and design principles. This package is designed to make it easy to install and load the crisprVerse packages in a single step. To learn more about the crisprVerse, visit .

Author: Jean-Philippe Fortin [aut, cre]

Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("crisprVerse")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	CRISPR, FunctionalGenomics, GeneTarget, Software
Version	1.1.0
In Bioconductor since	BioC 3.16 (R-4.2) (< 6 months)
License	MIT + file LICENSE
Depends	R (>= 4.2.0)
Imports	BiocManager, cli, crisprBase, crisprBowtie, crisprScore, crisprDesign, crisprViz, rlang, tools, utils
LinkingTo
Suggests	BiocStyle, knitr, testthat
SystemRequirements
Enhances
URL	https://github.com/crisprVerse/crisprVerse
BugReports	https://github.com/crisprVerse/crisprVerse/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/crisprVerse
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/crisprVerse
Package Short Url	https://bioconductor.org/packages/crisprVerse/
Package Downloads Report	Download Stats