DOI: 10.18129/B9.bioc.blacksheepr    

This is the development version of blacksheepr; for the stable release version, see blacksheepr.

Outlier Analysis for pairwise differential comparison

Bioconductor version: Development (3.17)

Blacksheep is a tool designed for outlier analysis in the context of pairwise comparisons in an effort to find distinguishing characteristics from two groups. This tool was designed to be applied for biological applications such as phosphoproteomics or transcriptomics, but it can be used for any data that can be represented by a 2D table, and has two sub populations within the table to compare.

Author: MacIntosh Cornwell [aut], RugglesLab [cre]

Maintainer: RugglesLab <ruggleslab at>

Citation (from within R, enter citation("blacksheepr")):


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HTML R Script Outlier Analysis using blacksheepr - Phosphoprotein
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biocViews DifferentialExpression, GeneExpression, RNASeq, Sequencing, Software, Transcription, Transcriptomics
Version 1.13.0
In Bioconductor since BioC 3.10 (R-3.6) (3 years)
License MIT + file LICENSE
Depends R (>= 3.6)
Imports grid, stats, grDevices, utils, circlize, viridis, RColorBrewer, ComplexHeatmap, SummarizedExperiment, pasilla
Suggests testthat (>= 2.1.0), knitr, BiocStyle, rmarkdown, curl
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