DOI: 10.18129/B9.bioc.TileDBArray    

This is the development version of TileDBArray; for the stable release version, see TileDBArray.

Using TileDB as a DelayedArray Backend

Bioconductor version: Development (3.17)

Implements a DelayedArray backend for reading and writing dense or sparse arrays in the TileDB format. The resulting TileDBArrays are compatible with all Bioconductor pipelines that can accept DelayedArray instances.

Author: Aaron Lun [aut, cre], Genentech, Inc. [cph]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("TileDBArray")):


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# The following initializes usage of Bioc devel


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biocViews DataRepresentation, Infrastructure, Software
Version 1.9.0
In Bioconductor since BioC 3.12 (R-4.0) (2 years)
License MIT + file LICENSE
Depends DelayedArray(>= 0.15.16)
Imports methods, Rcpp, tiledb, S4Vectors
LinkingTo Rcpp
Suggests knitr, Matrix, rmarkdown, BiocStyle, BiocParallel, testthat
URL https://github.com/LTLA/TileDBArray
BugReports https://github.com/LTLA/TileDBArray
Depends On Me
Imports Me
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Source Package TileDBArray_1.9.0.tar.gz
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Source Repository git clone https://git.bioconductor.org/packages/TileDBArray
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TileDBArray
Package Short Url https://bioconductor.org/packages/TileDBArray/
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