DOI: 10.18129/B9.bioc.SMAD    

This is the development version of SMAD; for the stable release version, see SMAD.

Statistical Modelling of AP-MS Data (SMAD)

Bioconductor version: Development (3.17)

Assigning probability scores to prey proteins captured in affinity purification mass spectrometry (AP-MS) expriments to infer protein-protein interactions. The output would facilitate non-specific background removal as contaminants are commonly found in AP-MS data.

Author: Qingzhou Zhang [aut, cre]

Maintainer: Qingzhou Zhang <zqzneptune at>

Citation (from within R, enter citation("SMAD")):


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biocViews MassSpectrometry, Proteomics, Software
Version 1.15.0
In Bioconductor since BioC 3.9 (R-3.6) (3.5 years)
License MIT + file LICENSE
Depends R (>= 3.6.0), RcppAlgos
Imports magrittr (>= 1.5), dplyr, stats, tidyr, utils, Rcpp (>= 1.0.0)
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Suggests knitr, rmarkdown, testthat, BiocStyle
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