DOI: 10.18129/B9.bioc.BiocCheck    

This is the development version of BiocCheck; for the stable release version, see BiocCheck.

Bioconductor-specific package checks

Bioconductor version: Development (3.17)

BiocCheck guides maintainers through Bioconductor best practicies. It runs Bioconductor-specific package checks by searching through package code, examples, and vignettes. Maintainers are required to address all errors, warnings, and most notes produced.

Author: Bioconductor Package Maintainer [aut], Lori Shepherd [aut], Daniel von Twisk [ctb], Kevin Rue [ctb], Marcel Ramos [aut, cre] , Leonardo Collado-Torres [ctb], Federico Marini [ctb]

Maintainer: Marcel Ramos <marcel.ramos at>

Citation (from within R, enter citation("BiocCheck")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


PDF   Reference Manual


biocViews Infrastructure, Software
Version 1.35.0
In Bioconductor since BioC 2.14 (R-3.1) (8.5 years)
License Artistic-2.0
Depends R (>= 4.2.0)
Imports biocViews(>= 1.33.7), BiocManager, stringdist, graph, httr, tools, codetools, methods, utils, knitr
Suggests RUnit, BiocGenerics, Biobase, jsonlite, rmarkdown, downloader, devtools (>= 1.4.1), usethis, BiocStyle, callr
Enhances codetoolsBioC
Depends On Me
Imports Me AnnotationHubData
Suggests Me GEOfastq, HMP16SData, HMP2Data, packFinder, preciseTAD, scpdata, SpectralTAD
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

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