DOI: 10.18129/B9.bioc.sevenbridges  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see sevenbridges.

Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R

Bioconductor version: 3.16

R client and utilities for Seven Bridges platform API, from Cancer Genomics Cloud to other Seven Bridges supported platforms.

Author: Soner Koc [aut, cre], Nan Xiao [aut], Tengfei Yin [aut], Dusan Randjelovic [ctb], Emile Young [ctb], Seven Bridges Genomics [cph, fnd]

Maintainer: Soner Koc <soner.koc at>

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HTML R Script Complete Guide for Seven Bridges API R Client
HTML R Script Creating Your Docker Container and Command Line Interface (with docopt)
HTML R Script Describe and Execute CWL Tools/Workflows in R
HTML R Script Find Data on CGC via Data Browser and Datasets API
HTML R Script IDE Container: RStudio Server, Shiny Server, and More
HTML R Script Master Tutorial: Use R for Cancer Genomics Cloud
PDF   Reference Manual
Text   NEWS


biocViews DataImport, Software, ThirdPartyClient
Version 1.28.0
In Bioconductor since BioC 3.3 (R-3.3) (7 years)
License Apache License 2.0 | file LICENSE
Depends methods, utils, stats
Imports httr, jsonlite, yaml, objectProperties, stringr, S4Vectors, docopt, curl, uuid, data.table
Suggests knitr, rmarkdown, testthat, readr
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