DOI: 10.18129/B9.bioc.levi  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see levi.

Landscape Expression Visualization Interface

Bioconductor version: 3.16

The tool integrates data from biological networks with transcriptomes, displaying a heatmap with surface curves to evidence the altered regions.

Author: Rafael Pilan [aut], Isabelle Silva [ctb], Agnes Takeda [ctb], Jose Rybarczyk Filho [ctb, cre, ths]

Maintainer: Jose Luiz Rybarczyk Filho <jose.luiz at unesp.br>

Citation (from within R, enter citation("levi")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



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biocViews GeneExpression, Network, Sequencing, Software
Version 1.16.0
In Bioconductor since BioC 3.8 (R-3.5) (4.5 years)
License GPL (>= 2)
Imports DT (>= 0.4), RColorBrewer (>= 1.1-2), colorspace (>= 1.3-2), dplyr (>= 0.7.4), ggplot2 (>= 2.2.1), httr (>= 1.3.1), igraph (>= 1.2.1), reshape2 (>= 1.4.3), shiny (>= 1.0.5), shinydashboard (>= 0.7.0), shinyjs (>= 1.0), xml2 (>= 1.2.0), knitr, Rcpp (>= 0.12.18), grid, grDevices, stats, utils, testthat, methods, rmarkdown
LinkingTo Rcpp
Suggests rmarkdown
Depends On Me
Imports Me
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package levi_1.16.0.tar.gz
Windows Binary levi_1.16.0.zip
macOS Binary (x86_64) levi_1.16.0.tgz
macOS Binary (arm64) levi_1.16.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/levi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/levi
Bioc Package Browser https://code.bioconductor.org/browse/levi/
Package Short Url https://bioconductor.org/packages/levi/
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